Posts
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Boxplots, reproducibility, and more!
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Do all inlets lose oxygen at the same rate?
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Physics and Biology correlation
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Let’s talk about error
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Thesis Recap and Next Steps
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DOin and Flushing Time
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Maybe it’s not the local processes
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Two-layer Volume and DO Budgets in 5 Inlets
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Two-Layer Budget Brainstorming
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Two-Layer Budget Test in Lynch Cove
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More Scatter and New Ideas
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Bottom DO negatively correlates with flushing time
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Weekly research updates
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21 Inlet Scatter
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Master’s Analyses Plans
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Characteristics of Hypoxic Inlets
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DO equation
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Summary figures for hypothesis generation
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Overview of 2014 - 2019 DO
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Bonus Figures
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Hypoxia and depth analysis continued…
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I think we’re on to something
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Quantifying DO differences
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Plans for new analysis
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The perplexing early spring bloom is still perplexing
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A preliminary look at results
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Model Status and Analysis Planning
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Why are there hydrodynamic differences?
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Model Run and Literature Fun
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Setting up the official model run
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New Year Planning
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The story of DIN
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PhD Courses and Model Uncertainty
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NTU visit and next research steps
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Model Evaluation Narrative
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In-depth Hood Canal evaluation
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Presentation Feedback and Willamette River
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Early look at model evaluation with old ICs
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Model re-set and new reading list
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First look at model evaluation results
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Preparing a Model Evaluation Run
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TRAPS Final Touches
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AttSW changes in fennel.h
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A shiny, new version of TRAPS
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Finalizing TRAPS and starting model evaluation
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Goodbye Bug
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Volume-less WWTPs in LiveOcean and ORCA Buoy Comparison
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Summer Planning and Continued Debugging
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GRS/GRC 2023 Reflection and Summer Planning
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Looking Ahead to the Next Steps
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Preliminary DO Results
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Forcing Debugging and Initial Model Results
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Testing Volume-less Vertical Sources
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The Beginning of the Resolution
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More on “w” in Double-Periodic, Flat-Shelf Grid
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LwSrc Tests in Even Simpler Grid
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Simple WWTP Tests in the ROMS Upwelling Grid
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Reflection on Ocean Visions
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Adding a WWTP to ROMS Upwelling
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Looking at LwSrc in Idealized Runs
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WWTP Hydrodynamic Differencing and More
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WWTP Hydrodynamics Comparison
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Testing Akima 4th Order Advection Scheme
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I’m a New Fan of the Kantha and Clayson Closure Model
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Continued Oak Harbor Lagoon WWTP Debugging
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LwSrc, Vshape, and CFL numbers
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Oak Harbor Lagoon WWTP Debugging
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New Year TRAPS Update
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TRAPS Update
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TRAPS Debugging Part V
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TRAPS Debugging Part IV
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TRAPS Debugging Part III
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TRAPS Debugging Part II
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TRAPS Debugging Part I
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Running TRAPS on LiveOcean
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Updated One-Year Schedule
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TRAPS Climatology
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TRAPS Forcing Update
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TRAPS Placement
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Structured Plan to Add WWTPs and Tiny Rivers to LiveOcean
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Proposed Idealized Estuary Work
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Nutrients Mini Experiment (Part 1)
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Salish Sea Model Nutrient Data
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Revisiting Goals and Scheduling
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Flat Shelf Upwelling Experiment (Part 3)
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Flat Shelf Upwelling Experiment (Part 2)
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Simultaneous River and WWTP Forcing
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WWTP Lat/Lon to Point Source Dischargers
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Flat Shelf Upwelling Experiment (Part 1)
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Open Boundary Conditions for Atmospheric Forcing
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Wind Experiment using BULK_FLUXES
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Benchmark, Debugging, Atmosphere, and Nutrients
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Tidally-Averaged Velocity and Salinity Profiles
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Process Flowchart for Running Idealized Estuary
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Idealized Estuary Mini Experiments
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Plotting Progress
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Github Pages Update
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New Idealized Estuary
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